User Tools

Site Tools


intel

This is an old revision of the document!


The Intel compiler is available on Magi. You can use it to compile your sequential and MPI codes. First you must load Intel modules :

 nicolas.greneche@magi3:~$ module load /softs/modules/intel/compiler/2022.0.2
 nicolas.greneche@magi3:~$ module load /softs/modules/intel/mkl/2022.0.2
 nicolas.greneche@magi3:~$ module load /softs/modules/intel/mpi/2021.5.1

Then, you can use icc of mpicc to compile sequential codes :

 nicolas.greneche@magi3:~$ icc -o hello hello.c
 nicolas.greneche@magi3:~$ ./hello
 Coucou !
 

Or MPI codes :

 nicolas.greneche@magi3:~$ mpicc -o pi pi.c
 nicolas.greneche@magi3:~$ mpirun -np 4 ./pi 256
 Elapsed time = 0.000006 seconds
 Pi is approximately 3.1875000000000000, Error is 0.0459073464102069

To submit Intel MPI jobs, you have to add this variable to your environement :

 export I_MPI_PMI_LIBRARY=/opt/slurm/lib/libpmi.so

And specify the number of MPI workers (here 40) :

 #SBATCH --ntasks=40

Here is a sample script that runs VASP on two nodes with 40 workers on each nodes (total of 80 workers) :

 #!/bin/bash
 #SBATCH --job-name=Au85Si15-NPT-300K
 #SBATCH --output=slurm.out
 #SBATCH --error=slurm.err
 #SBATCH --nodes=2
 #SBATCH --ntasks-per-node=40
 #SBATCH --partition=COMPUTE
 
 module load /softs/modules/intel/compiler/2022.0.2
 module load /softs/modules/intel/mkl/2022.0.2
 module load /softs/modules/intel/mpi/2021.5.1
 
 export I_MPI_PMI_LIBRARY=/opt/slurm/lib/libpmi.so
 
 srun /softs/vasp.5.4.4.pl2/bin/vasp_std
intel.1646647396.txt.gz · Last modified: 2022/03/07 11:03 by nico